Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC140912.1-201ENST00000577171 1054 ntBASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC008738.7-201ENST00000609744 511 ntBASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 AC073439.1-201ENST00000624121 1774 ntBASIC15.19■□□□□ 0.02
PCDHGA9Q9Y5G4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 TUBB8P12-201ENST00000308911 1335 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 TUBB7P-202ENST00000428444 1305 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 RPL37AP1-201ENST00000412502 279 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 AC007274.1-201ENST00000439805 662 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 MTND6P24-201ENST00000440466 518 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 AL132655.2-201ENST00000596276 594 ntBASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC092068.3-201ENST00000587894 2016 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC007541.1-201ENST00000570282 1469 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AL391825.1-201ENST00000457671 1364 ntBASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHGA9Q9Y5G4 AC105021.1-202ENST00000570572 669 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms