Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PKP3Q9Y446 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
PKP3Q9Y446 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP3Q9Y446 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PKP3Q9Y446 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PKP3Q9Y446 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 AC069335.1-201ENST00000489972 472 ntBASIC16.32■□□□□ 0.2
PKP3Q9Y446 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 AC063926.3-201ENST00000624734 5658 ntBASIC16.32■□□□□ 0.2
PKP3Q9Y446 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PKP3Q9Y446 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 MIR346-201ENST00000362234 95 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC004461.1-201ENST00000412461 403 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC254562.1-201ENST00000417586 456 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC142381.1-201ENST00000426099 345 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC004967.1-201ENST00000453589 447 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC024267.1-201ENST00000582320 895 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC055717.3-201ENST00000622967 595 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 AC134684.3-201ENST00000641758 218 ntBASIC16.31■□□□□ 0.2
PKP3Q9Y446 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PKP3Q9Y446 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PKP3Q9Y446 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP3Q9Y446 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PKP3Q9Y446 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms