Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.34□□□□□ -0.27
RCL1Q9Y2P8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RCL1Q9Y2P8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AL137013.1-201ENST00000432946 1228 ntBASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AC092647.4-201ENST00000457211 535 ntBASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 AC131009.4-201ENST00000624048 1740 ntBASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RCL1Q9Y2P8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AC073508.3-201ENST00000619697 1419 ntBASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AC091167.2-201ENST00000579581 588 ntBASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AC011498.5-201ENST00000592027 486 ntBASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AL592424.1-201ENST00000563624 1536 ntBASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms