Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 AC044860.1-202ENST00000559481 777 ntBASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 AC097359.3-201ENST00000603982 1210 ntBASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRIM35Q9UPQ4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AC074338.1-201ENST00000416825 156 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 RNA5SP421-201ENST00000516864 134 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AC025048.3-201ENST00000590609 569 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AC005702.4-201ENST00000618393 416 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AJ011932.1-201ENST00000621707 465 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM35Q9UPQ4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 HNRNPUP1-201ENST00000554987 333 ntBASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM35Q9UPQ4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 INGX-202ENST00000489074 768 ntBASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 SPDYE18-201ENST00000510091 1050 ntBASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM35Q9UPQ4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms