Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 RN7SL752P-201ENST00000463779 287 ntBASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AL512384.1-201ENST00000406683 331 ntBASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AL442647.2-201ENST00000429864 857 ntBASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AC104596.2-201ENST00000512793 793 ntBASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AC092552.1-201ENST00000547243 906 ntBASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 NKILA-202ENST00000614771 2598 ntBASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYNPO2Q9UMS6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AC098850.1-201ENST00000419919 790 ntBASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AC106886.1-201ENST00000568660 600 ntBASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 CTBP2P3-201ENST00000585629 1255 ntBASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNPO2Q9UMS6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYNPO2Q9UMS6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms