Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AL844908.2-201ENST00000609461 460 ntBASIC15.26■□□□□ 0.03
CTSFQ9UBX1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSFQ9UBX1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 TERF1P3-201ENST00000505638 1227 ntBASIC15.25■□□□□ 0.03
CTSFQ9UBX1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 MIR4321-201ENST00000592276 80 ntBASIC15.25■□□□□ 0.03
CTSFQ9UBX1 LINC02560-201ENST00000596379 459 ntBASIC15.25■□□□□ 0.03
CTSFQ9UBX1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.25■□□□□ 0.03
CTSFQ9UBX1 AL365330.1-201ENST00000607459 531 ntBASIC15.25■□□□□ 0.03
CTSFQ9UBX1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSFQ9UBX1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AC087499.5-201ENST00000452760 1342 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 ME2P1-201ENST00000426028 1970 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 FAM207CP-201ENST00000443486 507 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AC009477.1-201ENST00000452936 217 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 SERBP1P5-201ENST00000510079 1181 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 AC008761.3-201ENST00000624803 892 ntBASIC15.24■□□□□ 0.03
CTSFQ9UBX1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTSFQ9UBX1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTSFQ9UBX1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms