Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 RPS3AP44-201ENST00000425466 790 ntBASIC19.3■□□□□ 0.68
RNF216Q9NWF9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 OR7E26P-201ENST00000502808 1006 ntBASIC19.3■□□□□ 0.68
RNF216Q9NWF9 DUTP2-201ENST00000519164 463 ntBASIC19.3■□□□□ 0.68
RNF216Q9NWF9 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC008991.2-201ENST00000587850 487 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC073592.4-201ENST00000623827 446 ntBASIC19.3■□□□□ 0.68
RNF216Q9NWF9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF216Q9NWF9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC068418.2-201ENST00000577309 3703 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 PMPCAP1-201ENST00000508114 1576 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 TPTE2P6-202ENST00000445572 1007 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 DNAJB3-201ENST00000446806 729 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC117525.1-201ENST00000515228 503 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 RN7SKP287-201ENST00000516546 266 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 RNA5SP416-201ENST00000516838 111 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 RNA5SP415-201ENST00000517246 115 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 VPS29-203ENST00000546588 1059 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC040169.1-201ENST00000565382 521 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AP001462.1-201ENST00000594089 452 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC004775.1-201ENST00000607389 753 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC239868.4-201ENST00000608318 671 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AL078582.1-201ENST00000641922 511 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.29■□□□□ 0.68
RNF216Q9NWF9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF216Q9NWF9 CR382285.2-201ENST00000624662 1495 ntBASIC19.28■□□□□ 0.68
RNF216Q9NWF9 AC009061.2-203ENST00000635000 1462 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 UBALD1-205ENST00000590891 2641 ntBASIC19.28■□□□□ 0.68
RNF216Q9NWF9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 SIGLEC16-201ENST00000599858 1437 ntBASIC19.28■□□□□ 0.68
RNF216Q9NWF9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 IL25-202ENST00000397242 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.28■□□□□ 0.68
RNF216Q9NWF9 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms