Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 FAM220BP-201ENST00000377689 816 ntBASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 RNA5SP410-201ENST00000516285 106 ntBASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC009093.7-201ENST00000623853 1223 ntBASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AC067930.6-201ENST00000623257 4947 ntBASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.93□□□□□ -0.02
SDHAF3Q9NRP4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 RBPMS2P1-201ENST00000437762 623 ntBASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ALG1L8P-201ENST00000533887 760 ntBASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SDHAF3Q9NRP4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SDHAF3Q9NRP4 REXO1L8P-201ENST00000604378 1897 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms