Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.99■□□□□ 0.47
PDLIM7Q9NR12 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 KRT43P-201ENST00000434019 910 ntBASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 AC092337.1-201ENST00000568699 1129 ntBASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 RPSAP52-203ENST00000622976 1023 ntBASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 CDC14C-201ENST00000428251 1719 ntBASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.98■□□□□ 0.47
PDLIM7Q9NR12 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 AC004945.1-201ENST00000416738 983 ntBASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 MIR6069-201ENST00000620069 79 ntBASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDLIM7Q9NR12 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDLIM7Q9NR12 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms