Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC4Q9HBW1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 AL645939.2-201ENST00000427340 991 ntBASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 AC067863.1-201ENST00000494933 530 ntBASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PCDHB19P-201ENST00000570871 2371 ntBASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
LRRC4Q9HBW1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 TUBB3P1-201ENST00000405796 1332 ntBASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LRRC4Q9HBW1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC4Q9HBW1 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms