Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 ACTG1P14-201ENST00000446382 1122 ntBASIC15.51■□□□□ 0.07
BRF2Q9HAW0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AC061975.2-201ENST00000581722 295 ntBASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AC027307.2-201ENST00000591252 911 ntBASIC15.51■□□□□ 0.07
BRF2Q9HAW0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 FOXO1B-201ENST00000504678 1527 ntBASIC15.51■□□□□ 0.07
BRF2Q9HAW0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
BRF2Q9HAW0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AC004832.2-201ENST00000426397 482 ntBASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.5■□□□□ 0.07
BRF2Q9HAW0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 MIR574-201ENST00000385209 96 ntBASIC15.49■□□□□ 0.07
BRF2Q9HAW0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 AC142381.1-201ENST00000426099 345 ntBASIC15.49■□□□□ 0.07
BRF2Q9HAW0 PGAM5P1-201ENST00000518923 814 ntBASIC15.49■□□□□ 0.07
BRF2Q9HAW0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 AC026120.1-201ENST00000611536 926 ntBASIC15.49■□□□□ 0.07
BRF2Q9HAW0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.49■□□□□ 0.07
BRF2Q9HAW0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms