Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 SRD5A3P1-201ENST00000603021 949 ntBASIC17.43■□□□□ 0.38
NXF3Q9H4D5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NXF3Q9H4D5 AL662844.4-201ENST00000606367 2838 ntBASIC17.43■□□□□ 0.38
NXF3Q9H4D5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 FO393414.2-201ENST00000405153 598 ntBASIC17.42■□□□□ 0.38
NXF3Q9H4D5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.42■□□□□ 0.38
NXF3Q9H4D5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.42■□□□□ 0.38
NXF3Q9H4D5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 BNIP3P1-202ENST00000550043 1585 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AZGP1P1-201ENST00000411909 902 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 EEF1DP4-201ENST00000446006 880 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 RN7SL692P-201ENST00000464677 288 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AL596325.1-201ENST00000563991 1082 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AC027307.3-201ENST00000594262 1100 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 AC006449.6-201ENST00000612330 2296 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 OR6D1P-203ENST00000641209 4860 ntBASIC17.41■□□□□ 0.38
NXF3Q9H4D5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NXF3Q9H4D5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 KRT8P37-201ENST00000451609 1420 ntBASIC17.4■□□□□ 0.38
NXF3Q9H4D5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 DFFBP1-201ENST00000433250 979 ntBASIC17.4■□□□□ 0.38
NXF3Q9H4D5 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NXF3Q9H4D5 TP53TG3HP-202ENST00000569755 579 ntBASIC17.4■□□□□ 0.38
NXF3Q9H4D5 AC140912.1-201ENST00000577171 1054 ntBASIC17.4■□□□□ 0.38
NXF3Q9H4D5 AC074044.1-201ENST00000609673 707 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms