Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 MIR326-201ENST00000362220 95 ntBASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AC093813.1-201ENST00000605066 256 ntBASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 AC107373.2-201ENST00000607735 490 ntBASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 RNF216P1-203ENST00000404404 2427 ntBASIC20.09■□□□□ 0.81
CNTNAP4Q9C0A0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC006001.1-201ENST00000325130 474 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC023310.1-201ENST00000554836 735 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC015910.1-201ENST00000579400 975 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AL118558.3-201ENST00000607414 1079 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AL607033.1-201ENST00000623900 1599 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AL133373.2-201ENST00000623187 2828 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 AC018470.1-201ENST00000624790 3129 ntBASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.08■□□□□ 0.81
CNTNAP4Q9C0A0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 AC134407.2-201ENST00000625089 1978 ntBASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNTNAP4Q9C0A0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNTNAP4Q9C0A0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 RHOQP1-201ENST00000555758 579 ntBASIC20.06■□□□□ 0.8
CNTNAP4Q9C0A0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms