Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 AC008677.1-201ENST00000519230 1561 ntBASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF3BQ9BZI7 AL596257.1-201ENST00000641463 2694 ntBASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AP002414.2-201ENST00000591780 3365 ntBASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 AC092384.3-202ENST00000564646 2873 ntBASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF3BQ9BZI7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
UPF3BQ9BZI7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 PDPK2P-202ENST00000562415 1191 ntBASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 AC027796.2-201ENST00000575326 344 ntBASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 AC068137.2-201ENST00000605408 478 ntBASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.36■□□□□ 0.69
UPF3BQ9BZI7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms