Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 AC021087.4-201ENST00000563761 564 ntBASIC13.98□□□□□ -0.17
NICN1Q9BSH3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.98□□□□□ -0.17
NICN1Q9BSH3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 AC016027.1-202ENST00000607927 1699 ntBASIC13.98□□□□□ -0.17
NICN1Q9BSH3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NICN1Q9BSH3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 AC129492.6-201ENST00000611383 1305 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 ARMC10P1-201ENST00000313754 855 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 LAGE3P1-201ENST00000425356 484 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 SCARNA2-201ENST00000458748 420 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 KRT18P35-201ENST00000510488 1269 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 AC006557.2-201ENST00000592985 1240 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NICN1Q9BSH3 PCDHA3-202ENST00000532566 4594 ntBASIC13.97□□□□□ -0.17
NICN1Q9BSH3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
NICN1Q9BSH3 AC097376.2-205ENST00000610159 5334 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms