Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 AC243562.2-201ENST00000561247 970 ntBASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 AC132938.2-201ENST00000579188 680 ntBASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 CTBP2P3-201ENST00000585629 1255 ntBASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 AL591163.1-201ENST00000641757 987 ntBASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PAAF1Q9BRP4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 AC074338.1-201ENST00000416825 156 ntBASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 MIR8072-201ENST00000614241 80 ntBASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 Z97205.2-201ENST00000564697 1639 ntBASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PAAF1Q9BRP4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 U91328.1-201ENST00000437528 223 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 MYCLP2-201ENST00000449268 967 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 KRT17P7-201ENST00000451704 1104 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ELK1P1-201ENST00000485699 580 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 AC123567.1-201ENST00000548294 1261 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 OR6D1P-202ENST00000641007 5290 ntBASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PAAF1Q9BRP4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms