Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 AL080243.2-201ENST00000418783 582 ntBASIC18.3■□□□□ 0.52
TNFRSF25Q93038 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 AC097359.3-201ENST00000603982 1210 ntBASIC18.3■□□□□ 0.52
TNFRSF25Q93038 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 AC093028.1-201ENST00000622998 982 ntBASIC18.3■□□□□ 0.52
TNFRSF25Q93038 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF25Q93038 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 AZGP1P1-201ENST00000411909 902 ntBASIC18.29■□□□□ 0.52
TNFRSF25Q93038 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 HNRNPUP1-201ENST00000554987 333 ntBASIC18.29■□□□□ 0.52
TNFRSF25Q93038 AL079307.3-201ENST00000556114 283 ntBASIC18.29■□□□□ 0.52
TNFRSF25Q93038 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 KRT8P12-202ENST00000472924 1397 ntBASIC18.29■□□□□ 0.52
TNFRSF25Q93038 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TNFRSF25Q93038 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 CICP6-201ENST00000457191 2729 ntBASIC18.28■□□□□ 0.52
TNFRSF25Q93038 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.28■□□□□ 0.52
TNFRSF25Q93038 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.28■□□□□ 0.52
TNFRSF25Q93038 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.27■□□□□ 0.52
TNFRSF25Q93038 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms