Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HPS1Q92902 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HPS1Q92902 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.97□□□□□ -0.01
HPS1Q92902 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.97□□□□□ -0.01
HPS1Q92902 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HPS1Q92902 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HPS1Q92902 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.97□□□□□ -0.01
HPS1Q92902 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.97□□□□□ -0.01
HPS1Q92902 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HPS1Q92902 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 PPT1-215ENST00000641471 2368 ntBASIC14.96□□□□□ -0.01
HPS1Q92902 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.96□□□□□ -0.01
HPS1Q92902 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.96□□□□□ -0.01
HPS1Q92902 RNA5SP419-201ENST00000515908 135 ntBASIC14.96□□□□□ -0.01
HPS1Q92902 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HPS1Q92902 AC011467.2-201ENST00000598425 242 ntBASIC14.96□□□□□ -0.01
HPS1Q92902 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HPS1Q92902 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HPS1Q92902 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
HPS1Q92902 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HPS1Q92902 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
HPS1Q92902 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.96□□□□□ -0.02
HPS1Q92902 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
HPS1Q92902 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HPS1Q92902 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HPS1Q92902 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.96□□□□□ -0.02
HPS1Q92902 ALOX12P2-203ENST00000570921 1945 ntBASIC14.96□□□□□ -0.02
HPS1Q92902 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HPS1Q92902 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HPS1Q92902 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HPS1Q92902 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 IL9RP2-201ENST00000423948 1312 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 AC009949.1-201ENST00000623048 1830 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.95□□□□□ -0.02
HPS1Q92902 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HPS1Q92902 AC103564.2-201ENST00000432853 1299 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 AC007967.3-201ENST00000434308 558 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AC122714.2-201ENST00000502787 707 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
HPS1Q92902 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 AC005840.4-201ENST00000541242 2494 ntBASIC14.95□□□□□ -0.02
HPS1Q92902 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HPS1Q92902 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HPS1Q92902 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HPS1Q92902 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms