Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKL2Q92772 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKL2Q92772 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKL2Q92772 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.43■□□□□ 0.22
CDKL2Q92772 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.43■□□□□ 0.22
CDKL2Q92772 HNRNPDP1-201ENST00000439535 754 ntBASIC16.43■□□□□ 0.22
CDKL2Q92772 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.43■□□□□ 0.22
CDKL2Q92772 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CDKL2Q92772 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.43■□□□□ 0.22
CDKL2Q92772 AC012640.2-201ENST00000561606 901 ntBASIC16.43■□□□□ 0.22
CDKL2Q92772 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDKL2Q92772 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDKL2Q92772 AC126177.1-201ENST00000547829 2218 ntBASIC16.43■□□□□ 0.22
CDKL2Q92772 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDKL2Q92772 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 PCDHA3-202ENST00000532566 4594 ntBASIC16.43■□□□□ 0.22
CDKL2Q92772 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDKL2Q92772 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CDKL2Q92772 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CDKL2Q92772 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.42■□□□□ 0.22
CDKL2Q92772 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.42■□□□□ 0.22
CDKL2Q92772 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 AC117500.6-201ENST00000624871 588 ntBASIC16.42■□□□□ 0.22
CDKL2Q92772 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 AC022532.1-201ENST00000624563 1728 ntBASIC16.42■□□□□ 0.22
CDKL2Q92772 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDKL2Q92772 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.42■□□□□ 0.22
CDKL2Q92772 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CDKL2Q92772 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDKL2Q92772 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDKL2Q92772 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CDKL2Q92772 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 HAUS4P1-201ENST00000406739 1145 ntBASIC16.41■□□□□ 0.22
CDKL2Q92772 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.41■□□□□ 0.22
CDKL2Q92772 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.41■□□□□ 0.22
CDKL2Q92772 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.41■□□□□ 0.22
CDKL2Q92772 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDKL2Q92772 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms