Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC44A1Q8WWI5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AC087481.3-201ENST00000602886 1894 ntBASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AL513480.1-201ENST00000451731 511 ntBASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLC44A1Q8WWI5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLC44A1Q8WWI5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AC138035.3-201ENST00000622706 2791 ntBASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AC109635.5-201ENST00000533593 962 ntBASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AC117500.6-201ENST00000624871 588 ntBASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AC105250.1-201ENST00000509378 2057 ntBASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLC44A1Q8WWI5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms