Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 HAUS4P1-201ENST00000406739 1145 ntBASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AC117947.1-201ENST00000427448 529 ntBASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AP005901.3-202ENST00000581653 237 ntBASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 MIR4497-201ENST00000583208 89 ntBASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM4Q8WVI0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AC083849.1-201ENST00000615227 514 ntBASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AP001350.2-201ENST00000625104 1094 ntBASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM4Q8WVI0 AC079776.2-201ENST00000641154 1609 ntBASIC13.9□□□□□ -0.19
SMIM4Q8WVI0 OR2I1P-210ENST00000642037 4691 ntBASIC13.9□□□□□ -0.19
SMIM4Q8WVI0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms