Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCER1Q8TC90 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC24.27■■□□□ 1.48
CCER1Q8TC90 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CCER1Q8TC90 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 PMS2P4-201ENST00000412466 1052 ntBASIC24.26■■□□□ 1.47
CCER1Q8TC90 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 PRSS29P-201ENST00000440800 595 ntBASIC24.26■■□□□ 1.47
CCER1Q8TC90 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 AL691432.3-201ENST00000621860 400 ntBASIC24.26■■□□□ 1.47
CCER1Q8TC90 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 AC022532.1-201ENST00000624563 1728 ntBASIC24.26■■□□□ 1.47
CCER1Q8TC90 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC24.26■■□□□ 1.47
CCER1Q8TC90 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCER1Q8TC90 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 IGLL3P-201ENST00000412472 434 ntBASIC24.25■■□□□ 1.47
CCER1Q8TC90 SLC4A1APP2-201ENST00000424054 1259 ntBASIC24.25■■□□□ 1.47
CCER1Q8TC90 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 AL645728.2-201ENST00000641974 660 ntBASIC24.25■■□□□ 1.47
CCER1Q8TC90 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.25■■□□□ 1.47
CCER1Q8TC90 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCER1Q8TC90 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CCER1Q8TC90 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCER1Q8TC90 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 DDT-204ENST00000404092 805 ntTSL 3 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 MIR3909-201ENST00000579518 119 ntBASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 MIR7706-201ENST00000613747 67 ntBASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 AC136621.1-201ENST00000624017 2304 ntBASIC24.23■■□□□ 1.47
CCER1Q8TC90 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC24.23■■□□□ 1.47
CCER1Q8TC90 CICP13-201ENST00000422015 2789 ntBASIC24.23■■□□□ 1.47
CCER1Q8TC90 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCER1Q8TC90 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms