Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC148Q8NFR7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC148Q8NFR7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCDC148Q8NFR7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 AL391005.1-201ENST00000623953 2435 ntBASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 MIR648-201ENST00000385046 94 ntBASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC148Q8NFR7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 TSEN15P1-201ENST00000423257 515 ntBASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 SPDYE14P-201ENST00000442619 822 ntBASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC148Q8NFR7 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC148Q8NFR7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms