Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC092053.1-201ENST00000605787 1936 ntBASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 RARRES2P5-201ENST00000564013 466 ntBASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SYNPOQ8N3V7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AC133552.6-201ENST00000613406 534 ntBASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 COX11-210ENST00000639671 696 ntBASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AL033527.5-201ENST00000641382 801 ntBASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SYNPOQ8N3V7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPOQ8N3V7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms