Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AL512361.1-201ENST00000554200 418 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.78■□□□□ 0.28
SCML4Q8N228 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AL390754.1-201ENST00000619088 582 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 CDC14C-201ENST00000428251 1719 ntBASIC16.78■□□□□ 0.28
SCML4Q8N228 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.78■□□□□ 0.28
SCML4Q8N228 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCML4Q8N228 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCML4Q8N228 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.77■□□□□ 0.28
SCML4Q8N228 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.77■□□□□ 0.28
SCML4Q8N228 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.77■□□□□ 0.28
SCML4Q8N228 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SCML4Q8N228 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.77■□□□□ 0.28
SCML4Q8N228 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SCML4Q8N228 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.77■□□□□ 0.28
SCML4Q8N228 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.77■□□□□ 0.28
SCML4Q8N228 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.77■□□□□ 0.28
SCML4Q8N228 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.77■□□□□ 0.28
SCML4Q8N228 AC093214.1-201ENST00000511688 1107 ntBASIC16.77■□□□□ 0.28
SCML4Q8N228 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.77■□□□□ 0.28
SCML4Q8N228 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.77■□□□□ 0.28
SCML4Q8N228 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.77■□□□□ 0.28
SCML4Q8N228 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.77■□□□□ 0.28
SCML4Q8N228 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.77■□□□□ 0.28
SCML4Q8N228 AL603832.2-201ENST00000566195 2125 ntBASIC16.77■□□□□ 0.28
SCML4Q8N228 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.77■□□□□ 0.28
SCML4Q8N228 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.77■□□□□ 0.28
SCML4Q8N228 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.77■□□□□ 0.28
SCML4Q8N228 AL096865.1-201ENST00000606796 927 ntBASIC16.77■□□□□ 0.28
SCML4Q8N228 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCML4Q8N228 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.77■□□□□ 0.28
SCML4Q8N228 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
SCML4Q8N228 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SCML4Q8N228 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SCML4Q8N228 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SCML4Q8N228 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SCML4Q8N228 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.76■□□□□ 0.27
SCML4Q8N228 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SCML4Q8N228 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SCML4Q8N228 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms