Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS52Q8N1B4 AC006277.1-201ENST00000624348 1610 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AC009477.1-201ENST00000452936 217 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RN7SL692P-201ENST00000464677 288 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RN7SL828P-201ENST00000607615 303 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 AL589739.1-201ENST00000607720 493 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 TEX28P1-201ENST00000613479 1221 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 TEX28P2-201ENST00000617764 1221 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 CETN4P-206ENST00000642099 2168 ntBASIC17.61■□□□□ 0.41
VPS52Q8N1B4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS52Q8N1B4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 NME2P1-201ENST00000426182 414 ntBASIC17.6■□□□□ 0.41
VPS52Q8N1B4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 AC098859.1-201ENST00000502915 1238 ntBASIC17.6■□□□□ 0.41
VPS52Q8N1B4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 AC087499.5-201ENST00000452760 1342 ntBASIC17.6■□□□□ 0.41
VPS52Q8N1B4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms