Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 AC084346.2-201ENST00000607097 949 ntBASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL27A1Q8IZC6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 MTX1P1-201ENST00000440904 838 ntBASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 AL118558.3-201ENST00000607414 1079 ntBASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 AC008687.7-202ENST00000637404 953 ntBASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 AL138709.1-201ENST00000614840 1693 ntBASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 AC092171.3-201ENST00000610122 2651 ntBASIC14.94□□□□□ -0.02
COL27A1Q8IZC6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 IGHJ2P-201ENST00000454480 60 ntBASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 CALR4P-201ENST00000431943 946 ntBASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 AP003171.2-201ENST00000528208 925 ntBASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 RHOQP1-201ENST00000555758 579 ntBASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
COL27A1Q8IZC6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
COL27A1Q8IZC6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms