Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC016629.1-201ENST00000596579 586 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 CNN2P10-201ENST00000443067 918 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AP006547.1-201ENST00000563435 692 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC015967.2-201ENST00000624092 234 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC006435.4-201ENST00000625037 234 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 AL356737.1-201ENST00000634391 234 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 AC105020.1-201ENST00000435356 2205 ntBASIC19.36■□□□□ 0.69
SLX4Q8IY92 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 RNU1-114P-201ENST00000365297 166 ntBASIC19.36■□□□□ 0.69
SLX4Q8IY92 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 FAM197Y7-201ENST00000432892 766 ntBASIC19.36■□□□□ 0.69
SLX4Q8IY92 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 AL138709.1-201ENST00000614840 1693 ntBASIC19.36■□□□□ 0.69
SLX4Q8IY92 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLX4Q8IY92 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.36■□□□□ 0.69
SLX4Q8IY92 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 AKR7A2P1-201ENST00000460134 915 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 ARTN-209ENST00000479128 471 ntTSL 3 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 RPSAP36-202ENST00000494591 1261 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ACR-203ENST00000529621 708 ntTSL 5 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC079328.1-201ENST00000560358 952 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 AL096828.3-201ENST00000615354 462 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC145423.3-201ENST00000615987 467 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC018735.1-201ENST00000437208 1502 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 AC138028.6-201ENST00000616106 1482 ntBASIC19.35■□□□□ 0.69
SLX4Q8IY92 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLX4Q8IY92 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.35■□□□□ 0.69
SLX4Q8IY92 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms