Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 RPS2P28-201ENST00000314255 741 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 MIR648-201ENST00000385046 94 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC139887.3-201ENST00000568585 713 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC025062.2-201ENST00000605477 670 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC073592.4-201ENST00000623827 446 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC079776.2-201ENST00000641154 1609 ntBASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CRLF3Q8IUI8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PPT1-215ENST00000641471 2368 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 BX005266.1-201ENST00000473402 457 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 OR7E14P-202ENST00000530490 1290 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 MTDHP4-201ENST00000600287 670 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 AL161772.1-201ENST00000610494 4412 ntBASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CRLF3Q8IUI8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 AL136379.1-201ENST00000623471 2642 ntBASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 SLC25A1P1-201ENST00000528351 927 ntBASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.28■□□□□ 0.2
CRLF3Q8IUI8 AC010654.1-201ENST00000615722 808 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms