Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRC28Q86X40 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 AP002414.3-201ENST00000589352 1468 ntBASIC14.52□□□□□ -0.08
LRRC28Q86X40 KRT8P49-201ENST00000604166 1432 ntBASIC14.52□□□□□ -0.08
LRRC28Q86X40 PRAL-201ENST00000624952 3286 ntBASIC14.52□□□□□ -0.08
LRRC28Q86X40 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 AC073621.1-201ENST00000392730 636 ntBASIC14.52□□□□□ -0.09
LRRC28Q86X40 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 AC098831.1-202ENST00000438821 336 ntBASIC14.52□□□□□ -0.09
LRRC28Q86X40 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.52□□□□□ -0.09
LRRC28Q86X40 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC28Q86X40 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 LINC00982-205ENST00000420957 435 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ACTG1P4-201ENST00000425123 1122 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 AC136632.2-201ENST00000512891 861 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 AC145285.3-201ENST00000564603 959 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 AC106730.1-201ENST00000566722 1090 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 AL139424.1-201ENST00000607572 797 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 AC005593.1-201ENST00000624894 515 ntBASIC14.51□□□□□ -0.09
LRRC28Q86X40 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRRC28Q86X40 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC28Q86X40 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC28Q86X40 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRC28Q86X40 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRC28Q86X40 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC28Q86X40 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
LRRC28Q86X40 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC28Q86X40 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LRRC28Q86X40 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC28Q86X40 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRC28Q86X40 ZNF259P1-201ENST00000407656 1365 ntBASIC14.5□□□□□ -0.09
LRRC28Q86X40 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms