Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 REXO1L8P-201ENST00000604378 1897 ntBASIC13.71□□□□□ -0.22
RAI1Q7Z5J4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 RARRES2P5-201ENST00000564013 466 ntBASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 RN7SL752P-201ENST00000463779 287 ntBASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC015936.2-201ENST00000593177 259 ntBASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
RAI1Q7Z5J4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AL118508.1-201ENST00000613502 2345 ntBASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AL606495.2-201ENST00000605867 535 ntBASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RAI1Q7Z5J4 AC079328.2-201ENST00000561241 3354 ntBASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.68□□□□□ -0.22
RAI1Q7Z5J4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms