Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 ZBTB45P2-201ENST00000452245 1531 ntBASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 AC006001.1-201ENST00000325130 474 ntBASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT28Q7Z3Y7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 AL591846.1-201ENST00000451736 433 ntBASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PHKG1P2-201ENST00000457537 863 ntBASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 AC000095.1-201ENST00000603208 874 ntBASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT28Q7Z3Y7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 POU5F1P6-201ENST00000466990 990 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 AC026410.3-201ENST00000514280 936 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 ACTG1P17-201ENST00000558391 1119 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 AL008638.5-201ENST00000623814 1298 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 NOC2LP2-201ENST00000407594 1944 ntBASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT28Q7Z3Y7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 FAM197Y7-201ENST00000432892 766 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AC007969.1-201ENST00000433675 447 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 Z93015.1-201ENST00000451718 390 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AKR7A2P1-201ENST00000460134 915 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AC078819.1-201ENST00000547454 765 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AC012085.1-201ENST00000548270 765 ntBASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT28Q7Z3Y7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.58■■□□□ 1.05
KRT28Q7Z3Y7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.58■■□□□ 1.05
KRT28Q7Z3Y7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT28Q7Z3Y7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.58■■□□□ 1.05
KRT28Q7Z3Y7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms