Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 FAM220BP-201ENST00000377689 816 ntBASIC15.03■□□□□ -0
NUP54Q7Z3B4 HLA-H-201ENST00000383620 1096 ntBASIC15.03■□□□□ -0
NUP54Q7Z3B4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP54Q7Z3B4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP54Q7Z3B4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 ALG1L8P-201ENST00000533887 760 ntBASIC15.03■□□□□ -0
NUP54Q7Z3B4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 AL365330.1-201ENST00000607459 531 ntBASIC15.03■□□□□ -0
NUP54Q7Z3B4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP54Q7Z3B4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP54Q7Z3B4 AL391005.1-201ENST00000623953 2435 ntBASIC15.03■□□□□ -0
NUP54Q7Z3B4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NUP54Q7Z3B4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP54Q7Z3B4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 FOXO1B-201ENST00000504678 1527 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 KRT18P28-201ENST00000453838 1332 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.02■□□□□ -0
NUP54Q7Z3B4 AC025678.2-201ENST00000562061 970 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NUP54Q7Z3B4 AP001059.3-201ENST00000619053 235 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 LINC00628-201ENST00000628516 1289 ntBASIC15.02■□□□□ -0
NUP54Q7Z3B4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 AC007326.2-201ENST00000624224 7579 ntBASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 AP3S2-216ENST00000617003 1561 ntBASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NUP54Q7Z3B4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 GPS2P2-201ENST00000430745 888 ntBASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AC092183.1-201ENST00000469884 875 ntBASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP54Q7Z3B4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms