Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 AL139327.4-201ENST00000612362 153 ntBASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PDZRN4Q6ZMN7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AC073621.1-201ENST00000392730 636 ntBASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 BX842568.4-201ENST00000421222 227 ntBASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 PGAM5P1-201ENST00000518923 814 ntBASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AC092865.5-201ENST00000545435 363 ntBASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 AC005593.1-201ENST00000624894 515 ntBASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDZRN4Q6ZMN7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 AC007292.2-201ENST00000593524 1812 ntBASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDZRN4Q6ZMN7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms