Protein–RNA interactions for Protein: Q6XYD6

BRD3OS, BRD3 opposite strand, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3OSQ6XYD6 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 AL662799.1-202ENST00000614205 422 ntBASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 ALOX12P2-203ENST00000570921 1945 ntBASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
BRD3OSQ6XYD6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AC007541.1-201ENST00000570282 1469 ntBASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 GNAQP1-201ENST00000444815 1067 ntBASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AL132655.2-201ENST00000596276 594 ntBASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BRD3OSQ6XYD6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 KRT8P12-202ENST00000472924 1397 ntBASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 AL365330.1-201ENST00000607459 531 ntBASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 AL033527.5-202ENST00000641632 1098 ntBASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.11□□□□□ -0.31
BRD3OSQ6XYD6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms