Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC27A1Q6PCB7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 PCDHA14-201ENST00000506751 2298 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SPDYE19P-201ENST00000338590 713 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 AL353779.1-201ENST00000434793 351 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SRD5A3P1-201ENST00000603021 949 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 AC004790.1-201ENST00000612686 536 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC27A1Q6PCB7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 DFFBP1-201ENST00000433250 979 ntBASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 AC025048.6-201ENST00000634326 1161 ntBASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC27A1Q6PCB7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AZGP1P1-201ENST00000411909 902 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AC093004.1-201ENST00000508850 424 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AP005018.1-201ENST00000525475 301 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AC005225.4-201ENST00000557330 545 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AC012645.4-201ENST00000610691 1061 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC27A1Q6PCB7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC27A1Q6PCB7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms