Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 AC040169.1-201ENST00000565382 521 ntBASIC14.82□□□□□ -0.04
NIPAL3Q6P499 U1.21-201ENST00000580816 167 ntBASIC14.82□□□□□ -0.04
NIPAL3Q6P499 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 AC092865.6-201ENST00000642101 219 ntBASIC14.82□□□□□ -0.04
NIPAL3Q6P499 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 AC007326.2-201ENST00000624224 7579 ntBASIC14.82□□□□□ -0.04
NIPAL3Q6P499 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NIPAL3Q6P499 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 MIR648-201ENST00000385046 94 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PDPK2P-202ENST00000562415 1191 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AL671883.3-201ENST00000603274 991 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AC020765.3-201ENST00000613051 740 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PMS2P7-201ENST00000506558 1336 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 AC144831.1-201ENST00000573312 2656 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.81□□□□□ -0.04
NIPAL3Q6P499 FLJ16779-201ENST00000612722 7638 ntBASIC14.81□□□□□ -0.04
NIPAL3Q6P499 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AC068137.2-201ENST00000605408 478 ntBASIC14.8□□□□□ -0.04
NIPAL3Q6P499 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.8□□□□□ -0.04
NIPAL3Q6P499 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL3Q6P499 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms