Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SWSAP1Q6NVH7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 HIST3H2BA-201ENST00000436555 524 ntBASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 AC243562.2-201ENST00000561247 970 ntBASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 AC004233.3-201ENST00000607794 1269 ntBASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SWSAP1Q6NVH7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 BTBD7P1-201ENST00000447253 1453 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 FO393414.2-201ENST00000405153 598 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AC015922.1-201ENST00000421102 1152 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AC190387.1-201ENST00000551683 408 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
SWSAP1Q6NVH7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.96■□□□□ 0.47
SWSAP1Q6NVH7 GNAQP1-201ENST00000444815 1067 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms