Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AP000842.3-202ENST00000569238 1080 ntBASIC17.06■□□□□ 0.32
RNF43Q68DV7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 AL136317.3-201ENST00000618497 906 ntBASIC17.06■□□□□ 0.32
RNF43Q68DV7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF43Q68DV7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF43Q68DV7 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
RNF43Q68DV7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 TSPY16P-201ENST00000449843 468 ntBASIC17.05■□□□□ 0.32
RNF43Q68DV7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AP001059.3-201ENST00000619053 235 ntBASIC17.05■□□□□ 0.32
RNF43Q68DV7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 AC126177.1-201ENST00000547829 2218 ntBASIC17.05■□□□□ 0.32
RNF43Q68DV7 AL391256.1-201ENST00000443260 1855 ntBASIC17.05■□□□□ 0.32
RNF43Q68DV7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF43Q68DV7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF43Q68DV7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC142381.1-201ENST00000426099 345 ntBASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC055876.3-201ENST00000431496 288 ntBASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC005237.2-201ENST00000434368 219 ntBASIC17.04■□□□□ 0.32
RNF43Q68DV7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF43Q68DV7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF43Q68DV7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms