Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC008677.1-201ENST00000519230 1561 ntBASIC19.39■□□□□ 0.69
RNF20Q5VTR2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF20Q5VTR2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF20Q5VTR2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.37■□□□□ 0.69
RNF20Q5VTR2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 AL596257.1-201ENST00000641463 2694 ntBASIC19.37■□□□□ 0.69
RNF20Q5VTR2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF20Q5VTR2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF20Q5VTR2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms