Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TTC39BQ5VTQ0 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 AC093724.1-201ENST00000448659 1027 ntBASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 AC105917.1-201ENST00000506637 2539 ntBASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TTC39BQ5VTQ0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AL139400.1-201ENST00000366220 510 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 GPS2P2-201ENST00000430745 888 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AC098859.1-201ENST00000502915 1238 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AC004449.1-201ENST00000564240 433 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AC015911.4-201ENST00000588022 1070 ntBASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.92■□□□□ 0.3
TTC39BQ5VTQ0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 HLA-H-201ENST00000383620 1096 ntBASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.91■□□□□ 0.3
TTC39BQ5VTQ0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms