Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 AC004987.2-201ENST00000395959 1148 ntBASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 TTTY23B-201ENST00000442790 549 ntBASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 KRT17P8-201ENST00000540749 863 ntBASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 PCDH8P1-201ENST00000428983 2773 ntBASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHROOM1Q2M3G4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SHROOM1Q2M3G4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 CROCCP4-201ENST00000457096 498 ntBASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AC119751.2-201ENST00000504529 210 ntBASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 SNX29P1-201ENST00000548357 1007 ntBASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 AL162274.1-201ENST00000617191 1098 ntBASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHROOM1Q2M3G4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 AC018892.3-201ENST00000623986 2499 ntBASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 TIMM17BP1-201ENST00000545713 516 ntBASIC18.75■□□□□ 0.59
SHROOM1Q2M3G4 RARRES2P5-201ENST00000564013 466 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms