Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 AL139010.1-201ENST00000454878 894 ntBASIC19.47■□□□□ 0.71
RFX7Q2KHR2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RFX7Q2KHR2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 AC004987.2-201ENST00000395959 1148 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 SPDYE18-201ENST00000510091 1050 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 AL136982.4-201ENST00000437689 1740 ntBASIC19.46■□□□□ 0.71
RFX7Q2KHR2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFX7Q2KHR2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AC104794.3-201ENST00000566840 1248 ntBASIC19.45■□□□□ 0.7
RFX7Q2KHR2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 AL132655.2-201ENST00000596276 594 ntBASIC19.45■□□□□ 0.7
RFX7Q2KHR2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.45■□□□□ 0.7
RFX7Q2KHR2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX7Q2KHR2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms