Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3GAP1Q15042 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
RAB3GAP1Q15042 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 AP005117.1-202ENST00000581724 1908 ntBASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 RBPMS2P1-201ENST00000437762 623 ntBASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 WASH6P-202ENST00000359512 1437 ntBASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 KRT8P49-201ENST00000604166 1432 ntBASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 AC022532.1-201ENST00000624563 1728 ntBASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3GAP1Q15042 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 SPCS2P1-201ENST00000561636 679 ntBASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 LINC01225-203ENST00000563550 1244 ntBASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 AC005498.2-205ENST00000593218 784 ntBASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 AC013268.4-201ENST00000637413 2228 ntBASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 SNX33P1-201ENST00000592116 1762 ntBASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3GAP1Q15042 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 AC073347.1-201ENST00000421633 2643 ntBASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 GPS2P2-201ENST00000430745 888 ntBASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 DUX4L27-201ENST00000554796 1261 ntBASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB3GAP1Q15042 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3GAP1Q15042 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms