Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH17Q12864 MIR940-201ENST00000401276 94 ntBASIC16.4■□□□□ 0.22
CDH17Q12864 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.4■□□□□ 0.22
CDH17Q12864 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
CDH17Q12864 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 AC098859.1-201ENST00000502915 1238 ntBASIC16.4■□□□□ 0.22
CDH17Q12864 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.4■□□□□ 0.22
CDH17Q12864 AL138918.1-201ENST00000568306 659 ntBASIC16.4■□□□□ 0.22
CDH17Q12864 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.4■□□□□ 0.22
CDH17Q12864 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH17Q12864 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH17Q12864 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CDH17Q12864 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.4■□□□□ 0.22
CDH17Q12864 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CDH17Q12864 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDH17Q12864 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.4■□□□□ 0.22
CDH17Q12864 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDH17Q12864 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CDH17Q12864 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
CDH17Q12864 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CDH17Q12864 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CDH17Q12864 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 MCCD1P2-201ENST00000423228 335 ntBASIC16.39■□□□□ 0.21
CDH17Q12864 RN7SL589P-201ENST00000481268 310 ntBASIC16.39■□□□□ 0.21
CDH17Q12864 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH17Q12864 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CDH17Q12864 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH17Q12864 AC008267.7-201ENST00000624570 1194 ntBASIC16.39■□□□□ 0.21
CDH17Q12864 AC092902.6-201ENST00000641783 218 ntBASIC16.39■□□□□ 0.21
CDH17Q12864 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.39■□□□□ 0.21
CDH17Q12864 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CDH17Q12864 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.39■□□□□ 0.21
CDH17Q12864 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CDH17Q12864 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDH17Q12864 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH17Q12864 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH17Q12864 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CDH17Q12864 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.38■□□□□ 0.21
CDH17Q12864 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CDH17Q12864 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDH17Q12864 MIR574-201ENST00000385209 96 ntBASIC16.38■□□□□ 0.21
CDH17Q12864 AL022342.1-201ENST00000400363 863 ntBASIC16.38■□□□□ 0.21
CDH17Q12864 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.38■□□□□ 0.21
CDH17Q12864 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH17Q12864 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.38■□□□□ 0.21
CDH17Q12864 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.38■□□□□ 0.21
CDH17Q12864 AC024267.1-201ENST00000582320 895 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms