Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 RHOQP3-201ENST00000437982 621 ntBASIC15.91■□□□□ 0.14
CDH13P55290 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CDH13P55290 AC093909.1-201ENST00000504731 1122 ntBASIC15.91■□□□□ 0.14
CDH13P55290 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.91■□□□□ 0.14
CDH13P55290 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 AL009183.1-201ENST00000603760 355 ntBASIC15.91■□□□□ 0.14
CDH13P55290 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 AC126177.1-201ENST00000547829 2218 ntBASIC15.91■□□□□ 0.14
CDH13P55290 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 AC103702.1-201ENST00000548801 2630 ntBASIC15.91■□□□□ 0.14
CDH13P55290 AC104640.1-201ENST00000562617 2109 ntBASIC15.91■□□□□ 0.14
CDH13P55290 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.91■□□□□ 0.14
CDH13P55290 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH13P55290 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.9■□□□□ 0.14
CDH13P55290 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH13P55290 AC093724.1-201ENST00000448659 1027 ntBASIC15.9■□□□□ 0.14
CDH13P55290 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.9■□□□□ 0.14
CDH13P55290 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.9■□□□□ 0.14
CDH13P55290 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CDH13P55290 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.9■□□□□ 0.14
CDH13P55290 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDH13P55290 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDH13P55290 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDH13P55290 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 AC008677.1-201ENST00000519230 1561 ntBASIC15.89■□□□□ 0.13
CDH13P55290 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDH13P55290 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH13P55290 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.89■□□□□ 0.13
CDH13P55290 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.89■□□□□ 0.13
CDH13P55290 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 SLC25A6P4-201ENST00000586535 553 ntBASIC15.89■□□□□ 0.13
CDH13P55290 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.89■□□□□ 0.13
CDH13P55290 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms