Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH11P55287 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH11P55287 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH11P55287 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH11P55287 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH11P55287 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH11P55287 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
CDH11P55287 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH11P55287 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH11P55287 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH11P55287 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 GPAA1P2-202ENST00000606848 1787 ntBASIC14.94□□□□□ -0.02
CDH11P55287 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
CDH11P55287 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 CRYGEP-201ENST00000412192 528 ntBASIC14.94□□□□□ -0.02
CDH11P55287 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH11P55287 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.94□□□□□ -0.02
CDH11P55287 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH11P55287 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 AC010327.4-202ENST00000591484 748 ntBASIC14.94□□□□□ -0.02
CDH11P55287 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH11P55287 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH11P55287 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH11P55287 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH11P55287 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH11P55287 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH11P55287 LINC02447-202ENST00000501888 2146 ntBASIC14.93□□□□□ -0.02
CDH11P55287 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.93□□□□□ -0.02
CDH11P55287 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH11P55287 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 CDC14C-201ENST00000428251 1719 ntBASIC14.93□□□□□ -0.02
CDH11P55287 PRAL-201ENST00000624952 3286 ntBASIC14.93□□□□□ -0.02
CDH11P55287 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CDH11P55287 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 AC023274.1-201ENST00000418278 595 ntBASIC14.93□□□□□ -0.02
CDH11P55287 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH11P55287 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH11P55287 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH11P55287 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CDH11P55287 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.93□□□□□ -0.02
CDH11P55287 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH11P55287 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 IGHV3-65-201ENST00000523210 341 ntBASIC14.93□□□□□ -0.02
CDH11P55287 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH11P55287 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 MIR3687-2-201ENST00000577708 61 ntBASIC14.93□□□□□ -0.02
CDH11P55287 AC008667.4-201ENST00000607370 168 ntBASIC14.93□□□□□ -0.02
CDH11P55287 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.93□□□□□ -0.02
CDH11P55287 MIR3687-1-201ENST00000614492 61 ntBASIC14.93□□□□□ -0.02
CDH11P55287 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.93□□□□□ -0.02
CDH11P55287 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CDH11P55287 AC023824.1-201ENST00000562945 2975 ntBASIC14.93□□□□□ -0.02
CDH11P55287 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.93□□□□□ -0.02
CDH11P55287 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms