Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH8P55286 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH8P55286 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH8P55286 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH8P55286 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH8P55286 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH8P55286 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH8P55286 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.28■□□□□ 0.36
CDH8P55286 AL133215.2-201ENST00000609242 977 ntBASIC17.28■□□□□ 0.36
CDH8P55286 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH8P55286 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH8P55286 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH8P55286 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CDH8P55286 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CDH8P55286 AL391005.1-201ENST00000623953 2435 ntBASIC17.27■□□□□ 0.36
CDH8P55286 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH8P55286 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH8P55286 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH8P55286 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CDH8P55286 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH8P55286 TREML5P-201ENST00000421694 576 ntBASIC17.27■□□□□ 0.36
CDH8P55286 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH8P55286 CYMP-203ENST00000474680 1263 ntBASIC17.27■□□□□ 0.36
CDH8P55286 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH8P55286 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
CDH8P55286 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH8P55286 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 PCDHA1-201ENST00000378133 2726 ntBASIC17.27■□□□□ 0.36
CDH8P55286 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH8P55286 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
CDH8P55286 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH8P55286 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH8P55286 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH8P55286 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH8P55286 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CDH8P55286 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
CDH8P55286 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 FO538757.1-201ENST00000623083 1397 ntBASIC17.27■□□□□ 0.35
CDH8P55286 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH8P55286 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.27■□□□□ 0.35
CDH8P55286 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH8P55286 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH8P55286 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CDH8P55286 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH8P55286 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH8P55286 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH8P55286 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH8P55286 MIR943-201ENST00000401286 94 ntBASIC17.26■□□□□ 0.35
CDH8P55286 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.26■□□□□ 0.35
CDH8P55286 AC107890.1-201ENST00000422478 521 ntBASIC17.26■□□□□ 0.35
CDH8P55286 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.26■□□□□ 0.35
CDH8P55286 AC067863.1-201ENST00000494933 530 ntBASIC17.26■□□□□ 0.35
CDH8P55286 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH8P55286 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH8P55286 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH8P55286 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms