Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.61■□□□□ 0.89
BRPF1P55201 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.61■□□□□ 0.89
BRPF1P55201 SPDYE17-201ENST00000412399 783 ntBASIC20.61■□□□□ 0.89
BRPF1P55201 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.61■□□□□ 0.89
BRPF1P55201 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 TSPY16P-201ENST00000449843 468 ntBASIC20.61■□□□□ 0.89
BRPF1P55201 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.61■□□□□ 0.89
BRPF1P55201 AC243562.2-201ENST00000561247 970 ntBASIC20.61■□□□□ 0.89
BRPF1P55201 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.61■□□□□ 0.89
BRPF1P55201 AL133215.2-201ENST00000609242 977 ntBASIC20.61■□□□□ 0.89
BRPF1P55201 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.61■□□□□ 0.89
BRPF1P55201 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
BRPF1P55201 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BRPF1P55201 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.61■□□□□ 0.89
BRPF1P55201 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.61■□□□□ 0.89
BRPF1P55201 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRPF1P55201 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
BRPF1P55201 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRPF1P55201 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BRPF1P55201 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.6■□□□□ 0.89
BRPF1P55201 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 AL139010.1-201ENST00000454878 894 ntBASIC20.6■□□□□ 0.89
BRPF1P55201 AC022494.1-201ENST00000466044 728 ntBASIC20.6■□□□□ 0.89
BRPF1P55201 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.6■□□□□ 0.89
BRPF1P55201 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.6■□□□□ 0.89
BRPF1P55201 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.6■□□□□ 0.89
BRPF1P55201 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRPF1P55201 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.6■□□□□ 0.89
BRPF1P55201 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.6■□□□□ 0.89
BRPF1P55201 BNIP3P1-202ENST00000550043 1585 ntBASIC20.59■□□□□ 0.89
BRPF1P55201 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
BRPF1P55201 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.59■□□□□ 0.89
BRPF1P55201 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 MIR661-201ENST00000384842 89 ntBASIC20.59■□□□□ 0.89
BRPF1P55201 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.59■□□□□ 0.89
BRPF1P55201 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.59■□□□□ 0.89
BRPF1P55201 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BRPF1P55201 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.59■□□□□ 0.89
BRPF1P55201 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 CYP4F24P-201ENST00000586049 1580 ntBASIC20.59■□□□□ 0.89
BRPF1P55201 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BRPF1P55201 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BRPF1P55201 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms