Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGCS2P54868 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.57■□□□□ 0.56
HMGCS2P54868 AC233724.13-201ENST00000598383 410 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 CU634019.7-201ENST00000624153 1185 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 FP236241.2-201ENST00000624906 1185 ntBASIC18.57■□□□□ 0.56
HMGCS2P54868 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.57■□□□□ 0.56
HMGCS2P54868 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS2P54868 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS2P54868 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS2P54868 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 BNIP3P1-202ENST00000550043 1585 ntBASIC18.56■□□□□ 0.56
HMGCS2P54868 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC245100.5-201ENST00000452108 331 ntBASIC18.56■□□□□ 0.56
HMGCS2P54868 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS2P54868 SLC25A47P1-201ENST00000531577 414 ntBASIC18.56■□□□□ 0.56
HMGCS2P54868 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS2P54868 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC133539.2-201ENST00000604757 467 ntBASIC18.56■□□□□ 0.56
HMGCS2P54868 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS2P54868 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS2P54868 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGCS2P54868 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HMGCS2P54868 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 AL162726.2-201ENST00000438986 1017 ntBASIC18.55■□□□□ 0.56
HMGCS2P54868 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS2P54868 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCS2P54868 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCS2P54868 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.55■□□□□ 0.56
HMGCS2P54868 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCS2P54868 MIR5189-201ENST00000577370 114 ntBASIC18.55■□□□□ 0.56
HMGCS2P54868 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.55■□□□□ 0.56
HMGCS2P54868 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.55■□□□□ 0.56
HMGCS2P54868 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGCS2P54868 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HMGCS2P54868 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HMGCS2P54868 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 PKD1P1-201ENST00000458669 6805 ntBASIC18.55■□□□□ 0.56
HMGCS2P54868 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HMGCS2P54868 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.55■□□□□ 0.56
HMGCS2P54868 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HMGCS2P54868 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS2P54868 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 PDIA3P1-201ENST00000471856 1510 ntBASIC18.54■□□□□ 0.56
HMGCS2P54868 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HMGCS2P54868 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
HMGCS2P54868 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.54■□□□□ 0.56
HMGCS2P54868 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 AC005052.1-201ENST00000625181 2492 ntBASIC18.54■□□□□ 0.56
HMGCS2P54868 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 FAM86MP-201ENST00000340703 885 ntBASIC18.54■□□□□ 0.56
HMGCS2P54868 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HMGCS2P54868 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms